Hi All,
Any help welcome as I have not compiles stuff in ages.
vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe failed
I am unfortunately having issues building fsl ( FSL - FslWiki )
It would seem that it fails building on my reel 9.4 server. At the following stage. Lots more errors following on but thought just this may help.
6899 [ 93%] Building CXX object Rendering/VolumeOpenGL2/CMakeFiles/vtkRenderingVolumeOpenGL2.dir/vtkOpenGLRayCastImageDisplayHelper.cxx.o
6900 cd /tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Rendering/VolumeOpenGL2 && /hpc/spack/lib/spack/e
nv/gcc/g++ -DVTK_IN_VTK -DvtkRenderingVolumeOpenGL2_EXPORTS -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-buil
d-wqkxlig/Rendering/VolumeOpenGL2 -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Rendering/VolumeOpenGL2 -I
/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/Core -I/tmp/root/spack-stage/spack-stage-vtk-
8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Common/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-bu
ild-wqkxlig/Utilities/KWIML -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Utilities/KWIML -I/tmp/root/spac
k-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Utilities/KWSys -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqk
xligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Utilities/KWSys -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wq
kxlig/ThirdParty/utf8 -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/ThirdParty/utf8 -I/tmp/root/spack-stag
e/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/DataModel -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligx
rsrz3qivw4owiu3krvgtdbqe/spack-src/Common/DataModel -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxli
g/Common/Math -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Common/Math -I/tmp/root/spack-stage/spack-stag
e-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/Misc -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3kr
vgtdbqe/spack-src/Common/Misc -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/System -I/tmp
/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Common/System -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxl
igxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/Transforms -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spac
k-src/Common/Transforms -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Filters/Core -I/tmp/root/s
pack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Filters/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3
qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/ExecutionModel -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-sr
c/Common/ExecutionModel -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Filters/General -I/tmp/roo
t/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Filters/General -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxlig
xrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/ComputationalGeometry -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgt
dbqe/spack-src/Common/ComputationalGeometry -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Filter
s/Sources -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Filters/Sources -I/tmp/root/spack-stage/spack-stag
e-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Imaging/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3k
rvgtdbqe/spack-src/Imaging/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Imaging/Math -I/tm
p/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Imaging/Math -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxl
igxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Rendering/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-s
rc/Rendering/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Common/Color -I/tmp/root/spack-s
tage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Common/Color -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4o
wiu3krvgtdbqe/spack-build-wqkxlig/Filters/Geometry -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Filters/G
eometry -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/Rendering/OpenGL2 -I/tmp/root/spack-stage/
spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/Rendering/OpenGL2 -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4o
wiu3krvgtdbqe/spack-build-wqkxlig/ThirdParty/glew -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/ThirdParty
/glew -I/hpc/spack/opt/spack/linux-rhel9-zen4/gcc-11.4.1/glew-2.2.0-6fv53lwjw6owcxmtmsgo5d446hxx6ihw/include -I/tmp/root/spack-stage/spack-stage-vtk-8
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tdbqe/spack-src/Rendering/Volume -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/IO/XML -I/tmp/roo
t/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/IO/XML -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qiv
w4owiu3krvgtdbqe/spack-build-wqkxlig/IO/Core -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/IO/Core -I/tmp/
root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/ThirdParty/doubleconversion -I/tmp/root/spack-stage/spack
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version-3.3.0-iww7ya5bn5dyd2pnlyhbeokrcaetggfp/include/double-conversion -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdb
qe/spack-build-wqkxlig/ThirdParty/lz4 -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/ThirdParty/lz4 -I/hpc/
spack/opt/spack/linux-rhel9-zen4/gcc-11.4.1/lz4-1.9.4-xrfhm6rar3slc42w2gjwlyixqn2m4gyd/include -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligx
rsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/ThirdParty/lzma -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src
/ThirdParty/lzma -I/hpc/spack/opt/spack/linux-rhel9-zen4/gcc-11.4.1/xz-5.4.6-lpfvsac7cny3tjhxnhybqhlsngzmst6g/include -I/tmp/root/spack-stage/spack-st
age-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/ThirdParty/zlib -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4o
wiu3krvgtdbqe/spack-src/ThirdParty/zlib -I/hpc/spack/opt/spack/linux-rhel9-zen4/gcc-11.4.1/zlib-ng-2.1.6-oiiy6znx6natzub6nmicbvzp7z5chg2m/include -I/t
mp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-build-wqkxlig/IO/XMLParser -I/tmp/root/spack-stage/spack-stage-vtk-8
.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/IO/XMLParser -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-bu
ild-wqkxlig/ThirdParty/expat -I/tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3qivw4owiu3krvgtdbqe/spack-src/ThirdParty/expat -I/hpc/spack/o
pt/spack/linux-rhel9-zen4/gcc-11.4.1/expat-2.6.2-ayfi4ykuzg4erguxtxob5p7guebglylc/include -isystem /hpc/spack/opt/spack/linux-rhel9-zen4/gcc-11.4.1/me
sa-23.3.6-dxha2sefk47aq6oizbfwb5szdo5hrx4e/include -O3 -DNDEBUG -std=c++11 -fPIC -fvisibility=hidden -MD -MT Rendering/VolumeOpenGL2/CMakeFiles/vtkRen
deringVolumeOpenGL2.dir/vtkOpenGLRayCastImageDisplayHelper.cxx.o -MF CMakeFiles/vtkRenderingVolumeOpenGL2.dir/vtkOpenGLRayCastImageDisplayHelper.cxx.o
.d -o CMakeFiles/vtkRenderingVolumeOpenGL2.dir/vtkOpenGLRayCastImageDisplayHelper.cxx.o -c /tmp/root/spack-stage/spack-stage-vtk-8.2.1a-wqkxligxrsrz3q
ivw4owiu3krvgtdbqe/spack-src/Rendering/VolumeOpenGL2/vtkOpenGLRayCastImageDisplayHelper.cxx
6901 /usr/bin/ld: CMakeFiles/vtkProbeOpenGLVersion.dir/vtkProbeOpenGLVersion.cxx.o: in function `vtkRenderingOpenGL2_ModuleInit::~vtkRenderingOpenGL2_Modul
eInit()':
>> 6902 vtkProbeOpenGLVersion.cxx:(.text._ZN30vtkRenderingOpenGL2_ModuleInitD2Ev[_ZN30vtkRenderingOpenGL2_ModuleInitD5Ev]+0x5): undefined reference to `vtkRen
deringOpenGL2_AutoInit_Destruct()'
6903 /usr/bin/ld: CMakeFiles/vtkProbeOpenGLVersion.dir/vtkProbeOpenGLVersion.cxx.o: in function `main':
>> 6904 vtkProbeOpenGLVersion.cxx:(.text.startup+0x10): undefined reference to `vtkRenderer::New()'
>> 6905 /usr/bin/ld: vtkProbeOpenGLVersion.cxx:(.text.startup+0x18): undefined reference to `vtkRenderWindow::New()'
>> 6906 /usr/bin/ld: vtkProbeOpenGLVersion.cxx:(.text.startup+0x50): undefined reference to `vtkObjectBase::GetClassName() const'